The state budget, which the N.C. General Assembly passed Friday, will decrease the UNC system's recurring funding by about $14.5 million.
But UNC-system President Molly Broad said the budget supports a majority of the system's needs and provides new funding for areas like enrollment growth and need-based student financial aid.
The budget provides $28.4 million for enrollment growth, $12 million for distance education enrollment increases and $8.9 million for need-based aid.
Broad said full funding for enrollment growth was one of the UNC system's victories.
"If (legislators) had only partially funded it, it would cause a precedent that would easily have carried on in the years ahead," she said.
UNC system enrollment increased this year by about 7,000 -- only part of the estimated increase of more than 40,000 students between 1998 and 2008.
But Broad said she is worried about a reduction in faculty positions and a lack of funding for faculty salary increases in this year's budget.
"The University's competitive position will further deteriorate this year," she said.
Broad said UNC-system schools are vulnerable to raiding, which is when other universities lure faculty away with offers of higher pay and better benefits.